Centre for Bioengineering

Publications

  • Correction: Super-Resolution Imaging Strategies for Cell Biologists Using a Spinning Disk Microscope
    Hosny NA, Song M, Connelly JT, Ameer-Beg S, Knight MM and Wheeler AP
    Plos One, Public Library of Science (Plos) vol. 8 (12) 
    30-12-2013
  • Surface topography regulates wnt signaling through control of primary cilia structure in mesenchymal stem cells.
    McMurray RJ, Wann AKT, Thompson CL, Connelly JT and Knight MM
    Sci Rep vol. 3 
    18-12-2013
  • Nanointerfacial strength between non-collagenous protein and collagen fibrils in antler bone
    Hang F, Gupta HS and BARBER AH
    Journal of The Royal Society Interface, Royal Society Publishing vol. 11 (92) 
    18-12-2013
  • Interleukin-1β sequesters hypoxia inducible factor 2α to the primary cilium.
    Wann AK, Thompson CL, Chapple JP and Knight MM
    Cilia vol. 2 (1) 
    13-12-2013
  • Intimal hyperplasia following implantation of helical-centreline and straight-centreline stents in common carotid arteries in healthy pigs: influence of intraluminal flow†
    Gerald C, Seneviratne A, Heraty KB, Monaco C, Burke MG, Krams R, Chang CC, Coppola G and Gilson P
    Journal of The Royal Society Interface, The Royal Society vol. 10 (89) 
    06-12-2013
  • Towards Hybrid EEG-EMG-Based Control Approaches to be Used in Bio-robotics Applications: Current Status, Challenges and Future Directions
    Lalitharatne TD, Teramoto K, Hayashi Y and Kiguchi K
    Paladyn Journal of Behavioral Robotics, De Gruyter vol. 4 (2), 147-154.  
    01-12-2013
  • Numerical Simulations of Deformation and Aggregation of Red Blood Cells in Shear Flow
    Low HT, Ju M, Sui Y, Nazir T, Namgung B and Kim S
    Critical Reviews in Biomedical Engineering vol. 41 (4-5), 425-434.  
    01-12-2013
  • Intrafibrillar plasticity through mineral/collagen sliding is the dominant mechanism for the extreme toughness of antler bone
    Gupta HS, Krauss S, Kerschnitzki M, Karunaratne A, Dunlop JWC, Barber AH, Boesecke P, Funari SS and Fratzl P
    Journal of The Mechanical Behavior of Biomedical Materials vol. 28, 366-382.  
    01-12-2013
  • FHOD1 Is Needed for Directed Forces and Adhesion Maturation during Cell Spreading and Migration
    Iskratsch T, Yu C-H, Mathur A, Liu S, Stévenin V, Dwyer J, Hone J, Ehler E and Sheetz M
    Developmental Cell, Elsevier vol. 27 (5), 545-559.  
    01-12-2013
  • Chinese social media reaction to the MERS-CoV and avian influenza A(H7N9) outbreaks
    Fung IC-H, Fu K-W, Ying Y, Schaible B, Hao Y, Chan C-H and Tse ZT-H
    Infectious Diseases of Poverty, Springer Nature vol. 2 (1) 
    01-12-2013
  • Three-dimensional dynamics of oblate and prolate capsules in shear flow
    Wang Z, Sui Y, Spelt PDM and Wang W
    Physical Review E: Statistical, Nonlinear, and Soft Matter Physics, American Physical Society vol. 88 
    26-11-2013
  • Abstract 18249: Spatially-Integrated Vectorcardiogram: An Enabling Technique for Arrhythmia Cardiac Gating in High-Field MRI
    Gregory TS and Tse ZT
    Circulation, Wolters Kluwer vol. 128 (suppl_22) 
    26-11-2013
  • Raman spectroscopic evidence of tissue restructuring in heat‐induced tissue fusion
    Su L, Cloyd KL, Arya S, Hedegaard MAB, Steele JAM, Elson DS, Stevens MM and Hanna GB
    Journal of Biophotonics, Wiley vol. 7 (9), 713-723.  
    15-11-2013
  • Stent encrustation in feline and human artificial urine: does the low molecular weight composition account for the difference?
    Shafat M, Rajakumar K, Syme H, Buchholz N and Knight MM
    Urolithiasis vol. 41 (6), 481-486.  
    01-11-2013
  • Histone deacetylase 3 unconventional splicing mediates endothelial-to-mesenchymal transition through transforming growth factor β2.
    Zeng L, Wang G, Ummarino D, Margariti A, Xu Q, Xiao Q, Wang W, Zhang Z, Yin X, Mayr M, Cockerill G, Li JY-S, Chien S, Hu Y and Xu Q
    J Biol Chem vol. 288 (44), 31853-31866.  
    01-11-2013
  • Degradation behaviour of thin polymer films of poly (amide ester) hydrogel using quartz crystal microbalance
    Dzaraini K, Norizan A, Krause S, Hunter C and Milanesi L
    Advanced Materials Research vol. 812, 38-45.  
    29-10-2013
  • Low oxygen tension increased FN-f induced catabolic activities - response prevented with biomechanical signals
    Parker E, Vessillier S, Pinguaan-Murphy B, Wan Abas WAB, Bader DL and Chowdhury TT
    Arthritis Research and Therapy, Biomed Central vol. 15 (5), R163-R163.  
    25-10-2013
  • MicroRNA-200C and -150 play an important role in endothelial cell differentiation and vasculogenesis by targeting transcription repressor ZEB1.
    Luo Z, Wen G, Wang G, Pu X, Ye S, Xu Q, Wang W and Xiao Q
    Stem Cells vol. 31 (9), 1749-1762.  
    01-09-2013
  • Numerical simulation of the hydrodynamics of endothelial glycocalyx under shear flow
    Ye S, Wang W and Shao X
    IEEE International Conference On Control and Automation, Icca, 923-928.  
    26-08-2013
  • Stabilization of atherosclerotic plaques: an update
    Ylä-Herttuala S, Bentzon JF, Daemen M, Falk E, Garcia-Garcia HM, Herrmann J, Hoefer I, Jauhiainen S, Jukema JW, Krams R, Kwak BR, Marx N, Naruszewicz M, Newby A, Pasterkamp G, Serruys PWJC, Waltenberger J, Weber C, Tokgözoglu L and Biology EWGOAAV
    European Heart Journal, Oxford University Press (Oup) vol. 34 (42), 3251-3258.  
    21-08-2013
  • Shear stress and nitric oxide transport affect NFkB dynamics in endothelial cells
    Bovens SM, Foin N, O'Clery N, Van Der Heiden K, Cuhlmann S, Carlsen H, Barahona M, Evans PC and Krams R
    European Heart Journal, Oxford University Press (Oup) vol. 34 (suppl_1) 
    02-08-2013
  • M1 macrophages are an early feature of shear stress modulated vulnerable atherosclerotic plaques
    Seneviratne AN, Cole JE, Goddard ME, Udalova I, Krams R and Monaco C
    European Heart Journal, Oxford University Press (Oup) vol. 34 (suppl_1) 
    02-08-2013
  • The role of the non-collagenous matrix in tendon function.
    Thorpe CT, Birch HL, Clegg PD and Screen HRC
    Int J Exp Pathol vol. 94 (4), 248-259.  
    01-08-2013
  • Helical sub-structures in energy-storing tendons provide a possible mechanism for efficient energy storage and return.
    Thorpe CT, Klemt C, Riley GP, Birch HL, Clegg PD and Screen HRC
    Acta Biomater vol. 9 (8), 7948-7956.  
    01-08-2013
  • Fatigue loading of tendon.
    Shepherd JH and Screen HRC
    Int J Exp Pathol vol. 94 (4), 260-270.  
    01-08-2013
  • Abstract 004: Microrna-22 Regulates Smooth Muscle Cell Differentiation From Stem Cells By Targeting Methyl Cpg Binding Protein 2
    Zhao H, Huang Y, Yu X, Wen G, Wang W, Ye S and Xiao Q
    Circulation Research, Wolters Kluwer vol. 113 (suppl_1) 
    01-08-2013
  • Are all osteocytes equal? Multiscale modelling of cortical bone to characterise the mechanical stimulation of osteocytes
    Vaughan TJ, Verbruggen SW and McNamara LM
    International Journal For Numerical Methods in Biomedical Engineering, Wiley vol. 29 (12), 1361-1372.  
    29-07-2013
  • Natriuretic peptide receptors regulate cytoprotective effects in a human ex vivo 3D/bioreactor model
    Peake N, Su N, Ramachandran M, Achan P, Salter DM, Bader DL, Moyes AJ, Hobbs AJ and Chowdhury TT
    Arthritis Research and Therapy vol. 15 (4) 
    24-07-2013
  • Microfabrication of nanoporous gold patterns for cell-material interaction studies.
    Daggumati P, Kurtulus O, Chapman CAR, Dimlioglu D and Seker E
    Journal of Visualized Experiments, Myjove (77) 
    15-07-2013
  • Microfabrication of Nanoporous Gold Patterns for Cell-material Interaction Studies
    Daggumati P, Kurtulus O, Chapman CAR, Dimlioglu D and Seker E
    Journal of Visualized Experiments, Myjove (77) 
    15-07-2013
  • Method for Percutaneously Introducing, and Removing, Anatomical Stenosis of Predetermined Severity In Vivo: The “Stenotic Stent”
    Foin N, Sen S, Petraco R, Nijjer S, Torii R, Kousera C, Broyd C, Mehta V, Xu Y, Mayet J, Hughes A, Di Mario C, Krams R, Francis D and Davies J
    Journal of Cardiovascular Translational Research, Springer Nature vol. 6 (4), 640-648.  
    04-06-2013
  • GAG depletion increases the stress-relaxation response of tendon fascicles, but does not influence recovery.
    Legerlotz K, Riley GP and Screen HRC
    Acta Biomater vol. 9 (6), 6860-6866.  
    01-06-2013
  • Decoupling geometrical and chemical cues directing epidermal stem cell fate on polymer brush-based cell micro-patterns.
    Tan KY, Lin H, Ramstedt M, Watt FM, Huck WTS and Gautrot JE
    Integr Biol (Camb) vol. 5 (6), 899-910.  
    01-06-2013
  • An efficient computational model for macroscale simulations of moving contact lines
    Sui Y and Spelt PDM
    Journal of Computational Physics vol. 242, 37-52.  
    01-06-2013
  • Systems biology of the functional and dysfunctional endothelium
    Frueh J, Maimari N, Homma T, Bovens SM, Pedrigi RM, Towhidi L and Krams R
    Cardiovascular Research, Oxford University Press (Oup) vol. 99 (2), 334-341.  
    06-05-2013
  • Vascular endothelial cell growth-activated XBP1 splicing in endothelial cells is crucial for angiogenesis
    Zeng L, Xiao Q, Chen M, Margariti A, Martin D, Ivetic A, Xu H, Mason J, Wang W, Cockerill G, Mori K, Yi-Shuan Li J, Chien S, Hu Y and Xu Q
    Circulation vol. 127 (16), 1712-1722.  
    23-04-2013
  • Voltage‐based device tracking in a 1.5 tesla MRI during imaging: initial validation in swine models
    Schmidt EJ, Tse ZTH, Reichlin TR, Michaud GF, Watkins RD, Butts‐Pauly K, Kwong RY, Stevenson W, Schweitzer J, Byrd I and Dumoulin CL
    Magnetic Resonance in Medicine, Wiley vol. 71 (3), 1197-1209.  
    11-04-2013
  • A 1.5T MRI‐conditional 12‐lead electrocardiogram for MRI and intra‐MR intervention
    Tse ZTH, Dumoulin CL, Clifford GD, Schweitzer J, Qin L, Oster J, Jerosch‐Herold M, Kwong RY, Michaud G, Stevenson WG and Schmidt EJ
    Magnetic Resonance in Medicine, Wiley vol. 71 (3), 1336-1347.  
    11-04-2013
  • Radiofrequency-induced small bowel thermofusion: an ex vivo study of intestinal seal adequacy using mechanical and imaging modalities
    Arya S, Hadjievangelou N, Lei S, Kudo H, Goldin RD, Darzi AW, Elson DS and Hanna GB
    Surgical Endoscopy, Springer Nature vol. 27 (9), 3485-3496.  
    10-04-2013
  • Fluid flow in the osteocyte mechanical environment: a fluid–structure interaction approach
    Verbruggen SW, Vaughan TJ and McNamara LM
    Biomechanics and Modeling in Mechanobiology, Springer Nature vol. 13 (1), 85-97.  
    09-04-2013
  • ROBOTICS IN NATURAL ORIFICE TRANSLUMINAL ENDOSCOPIC SURGERY
    ZHOU Y, REN H, MENG MQ-H, TSE ZTH and YU H
    Journal of Mechanics in Medicine and Biology, World Scientific Publishing vol. 13 (02) 
    01-04-2013
  • FN-f induced catabolic activities are dependent on oxygen tension in chondrocyte/agarose constructs subjected to biomechanical signals
    Parker E, Pinguuan-Murphy B, Bader DL and Chowdhury TT
    Osteoarthritis and Cartilage, Elsevier vol. 21 
    01-04-2013
  • Response to letter to the editor: End effects in mechanical testing of biomaterials
    Anssari-Benam A, Legerlotz K, Bader DL and Screen HRC
    Journal of Biomechanics vol. 46 (5) 
    15-03-2013
  • Microstructure and chemistry affects apatite nucleation on calcium phosphate bone graft substitutes
    Campion CR, Ball SL, Clarke DL and Hing KA
    Journal of Materials Science: Materials in Medicine vol. 24 (3), 597-610.  
    01-03-2013
  • Biological vascular grafts for hemodialysis access.
    Hossain MA, Frampton AE, Chowdhury TT and Morsey M
    Expert Rev Med Devices, Informa Healthcare vol. 2 (10), 171-175.  
    01-03-2013
  • Characterisation of breast implant surfaces and correlation with fibroblast adhesion
    Valencia-Lazcano AA, Alonso-Rasgado T and Bayat A
    Journal of The Mechanical Behavior of Biomedical Materials, Elsevier vol. 21, 133-148.  
    27-02-2013
  • Osmotic challenge drives rapid and reversible chromatin condensation in chondrocytes.
    Irianto J, Swift J, Martins RP, McPhail GD, Knight MM, Discher DE and Lee DA
    Biophys J vol. 104 (4), 759-769.  
    19-02-2013
  • Development of novel fluorescent probes for the analysis of protein interactions under physiological conditions with medical devices.
    Mafina M-K, Hing KA and Sullivan AC
    Langmuir vol. 29 (5), 1420-1426.  
    05-02-2013
  • Up-Regulation of Tension-Related Proteins in Keloids
    Suarez E, Syed F, Alonso-Rasgado T, Mandal P and Bayat A
    Plastic & Reconstructive Surgery, Wolters Kluwer vol. 131 (2), 158e-173e.  
    01-02-2013
  • The contact electrogram and its architectural determinants in atrial fibrillation
    Zaman JA, Al-Aidarous S, Patel PM, Debney MT, Roney C, Chang ET, Chowdhury RA and Peters N
    The Lancet, Elsevier vol. 381 
    01-02-2013
  • Symmetrically reduced stiffness and increased extensibility in compression and tension at the mineralized fibrillar level in rachitic bone
    Karunaratne A, Boyde A, Esapa CT, Hiller J, Terrill NJ, Brown SDM, Cox RD, Thakker RV and Gupta HS
    Bone vol. 52 (2), 689-698.  
    01-02-2013
  • Cyclic loading of tendon fascicles using a novel fatigue loading system increases interleukin-6 expression by tenocytes
    Legerlotz K, Jones GC, Screen HRC and Riley GP
    Scandinavian Journal of Medicine and Science in Sports vol. 23 (1), 31-37.  
    01-02-2013
  • The Role of Platelet-Endothelial Cell Adhesion Molecule-1 in Atheroma Formation Varies Depending on the Site-Specific Hemodynamic Environment
    Harrison M, Smith E, Ross E, Krams R, Segers D, Buckley CD, Nash GB and Rainger GE
    Arteriosclerosis Thrombosis and Vascular Biology, Wolters Kluwer vol. 33 (4), 694-701.  
    31-01-2013
  • Validation and modification of asymptotic analysis of slow and rapid droplet spreading by numerical simulation
    Sui Y and Spelt PDM
    Journal of Fluid Mechanics vol. 715, 283-313.  
    25-01-2013
  • Arginase inhibition prevents the low shear stress-induced development of vulnerable atherosclerotic plaques in ApoE−/− mice
    Olivon VC, Fraga-Silva RA, Segers D, Demougeot C, de Oliveira AM, Savergnini SS, Berthelot A, de Crom R, Krams R, Stergiopulos N and da Silva RF
    Atherosclerosis, Elsevier vol. 227 (2), 236-243.  
    17-01-2013
  • XBP1 mRNA splicing triggers an autophagic response in endothelial cells through BECLIN-1 transcriptional activation
    Margariti A, Li H, Chen T, Martin D, Vizcay-Barrena G, Alam S, Karamariti E, Xiao Q, Zampetaki A, Zhang Z, Wang W, Jiang Z, Gao C, Ma B, Chen YG, Cockerill G, Hu Y, Xu Q and Zeng L
    Journal of Biological Chemistry vol. 288 (2), 859-872.  
    11-01-2013
  • Capacity for sliding between tendon fascicles decreases with ageing in injury prone equine tendons: a possible mechanism for age-related tendinopathy?
    Thorpe CT, Udeze CP, Birch HL, Clegg PD and Screen HR
    Eur Cell Mater vol. 25, 48-60.  
    08-01-2013
  • Voltage-based electroanatomic mapping system for MR-guided cardiac electrophysiology: preliminary swine validations
    Tse Z, Dumoulin C, Byrd I, Schweitzer J, Watkins R, Pauly KB, Kwong RY, Michaud GF, Stevenson W, Jolesz F and Schmidt EJ
    Journal of Cardiovascular Magnetic Resonance, Elsevier vol. 15 (Suppl 1) 
    01-01-2013
  • The surface charge of anti-bacterial coatings alters motility and biofilm architecture
    GAUTROT JEE, Rzhepishevska O, Hakobyan S, Ruhal R, Barbero D and Ramstedt M
    Journal of Biomaterials Science: Polymer Edition vol. 1 (6), 589-602.  
    01-01-2013
  • Synchrotron X-ray nanomechanical imaging of mineralized fiber composites.
    Karunaratne A, Terrill NJ and Gupta HS
    Methods Enzymol vol. 532, 415-473.  
    01-01-2013
  • Super-resolution imaging strategies for cell biologists using a spinning disk microscope.
    Hosny NA, Song M, Connelly JT, Ameer-Beg S, Knight MM and Wheeler AP
    Plos One vol. 8 (10) 
    01-01-2013
  • Shear stress-induced redistribution of the glycocalyx on endothelial cells in vitro
    Bai K and Wang W
    Biomechanics and Modeling in Mechanobiology, 1-9.  
    01-01-2013
  • Response to letter to the editor: End effects in mechanical testing of biomaterials
    Anssari-Benam A, Legerlotz K, Bader DL and Screen HRC
    Journal of Biomechanics 
    01-01-2013
  • Reluctant relaxation
    Lee D
    History Australia, Taylor & Francis vol. 10 (3), 149-170.  
    01-01-2013
  • Microstructural stress relaxation mechanics in functionally different tendons.
    Screen HRC, Toorani S and Shelton JC
    Med Eng Phys vol. 35 (1), 96-102.  
    01-01-2013
  • Microstructural stress relaxation mechanics in functionally different tendons
    Screen HRC, Toorani S and Shelton JC
    Medical Engineering and Physics vol. 35 (1), 96-102.  
    01-01-2013
  • Inertial coalescence of droplets on a partially wetting substrate
    Sui Y, Maglio M, Spelt PDM, Legendre D and Ding H
    Physics of Fluids vol. 25 (10) 
    01-01-2013
  • Improved cardiac gating at 3T with the “3D-QRS” method utilizing MRI-compatible 12-lead ECGs
    Tse Z, Dumoulin C, Watkins R, Pauly KB, Kwong R, Michaud G, Stevenson W, Jolesz F and Schmidt E
    Journal of Cardiovascular Magnetic Resonance, Elsevier vol. 15 (Suppl 1) 
    01-01-2013
  • Human & swine studies of concurrent 12-lead ECG & MRI
    Tse Z, Dumoulin C, Watkins R, Pauly KB, Byrd I, Schweitzer J, Kwong RY, Michaud GF, Stevenson W, Jolesz F and Schmidt EJ
    Journal of Cardiovascular Magnetic Resonance, Elsevier vol. 15 (Suppl 1) 
    01-01-2013
  • Helical sub-structures in energy-storing tendons provide a possible mechanism for efficient energy storage and return
    Thorpe CT, Klemt C, Riley GP, Birch HL, Clegg PD and Screen HRC
    Acta Biomaterialia vol. 9 (8), 7948-7956.  
    01-01-2013
  • Evaluation of Fuzzy-Neuro Modifiers for Compensation of the Effects of Muscle Fatigue on EMG-Based Control to be Used in Upper-Limb Power-Assist Exoskeletons
    LALITHARATNE TD, TERAMOTO K, HAYASHI Y, NANAYAKKARA T and KIGUCHI K
    Journal of Advanced Mechanical Design Systems and Manufacturing, Japan Society of Mechanical Engineers vol. 7 (4) 
    01-01-2013
  • Estimation of Forearm Supination/Pronation Motion Based on EEG Signals to Control an Artificial Arm
    KIGUCHI K, LALITHARATNE TD and HAYASHI Y
    Journal of Advanced Mechanical Design Systems and Manufacturing, Japan Society of Mechanical Engineers vol. 7 (1) 
    01-01-2013
  • Dependence of nanoconfined liquid behavior on boundary and bulk factors
    Sun J, Wang W and Wang HS
    Physical Review E: Statistical, Nonlinear, and Soft Matter Physics vol. 87 
    01-01-2013
  • Dependence between velocity slip and temperature jump in shear flows
    Sun J, Wang W and Wang HS
    The Journal of Chemical Physics, American Institute of Physics vol. 138 (23) 
    01-01-2013
  • Continuous and Uninterrupted Oxygen Tension Influences the Colony Formation and Oxidative Metabolism of Human Mesenchymal Stem Cells
    Pattappa G, Thorpe SD, Jegard NC, Heywood HK, de Bruijn JD and Lee DA
    Tissue Engineering Part C-Methods vol. 19 (1) 
    01-01-2013
  • Computer-Assisted Transoral Surgery with Flexible Robotics and Navigation Technologies: A Review of Recent Progress and Research Challenges
    Ren H, Lim CM, Wang J, Liu W, Song S, Li Z, Herbert G, Tse ZTH and Tan Z
    Critical Reviews in Biomedical Engineering, Begell House vol. 41 (4-5), 365-391.  
    01-01-2013
  • Biomimetic bone regeneration
    Hing KA
    , 207-237.  
    01-01-2013
  • Bardet-Biedl syndrome proteins control the cilia length through regulation of actin polymerization
    Hernandez-Hernandez V, Pravincumar P, Diaz-Font A, May-Simera H, Jenkins D, Knight M and Beales PL
    Human Molecular Genetics vol. 22 (19), 3858-3868.  
    01-01-2013
  • Antibacterial effect of incorporating silver ions in electrochemically deposited hydroxyapatite coating: An experimental study.
    Ghani Y, Coathup MJ, Hing KA and Blunn GW
    Jrsm Short Rep vol. 4 (9) 
    01-01-2013