Centre for Bioengineering

Publications

  • Heat shock induces rapid resorption of primary cilia
    Prodromou NV, Thompson CL, Osborn DPS, Cogger KF, Ashworth R, Knight MM, Beales PL and Chapple JP
    Development, The Company of Biologists vol. 139 (24), e2408-e2408.  
    15-12-2012
  • Heat shock induces rapid resorption of primary cilia
    Prodromou NV, Thompson CL, Osborn DPS, Cogger KF, Ashworth R, Knight MM, Beales PL and Chapple JP
    Journal of Cell Science vol. 125 (18), 4297-4305.  
    01-12-2012
  • New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures
    Sillitoe I, Cuff AL, Dessailly BH, Dawson NL, Furnham N, Lee D, Lees JG, Lewis TE, Studer RA, Rentzsch R, Yeats C, Thornton JM and Orengo CA
    Nucleic Acids Research, Oxford University Press (Oup) vol. 41 (D1), d490-d498.  
    29-11-2012
  • Fibromodulin Deficiency Reduces Low-Density Lipoprotein Accumulation in Atherosclerotic Plaques in Apolipoprotein E–Null Mice
    Shami A, Gustafsson R, Kalamajski S, Krams R, Segers D, Rauch U, Roos G, Nilsson J, Oldberg Å and Hultgårdh-Nilsson A
    Arteriosclerosis Thrombosis and Vascular Biology, Wolters Kluwer vol. 33 (2), 354-361.  
    29-11-2012
  • Specialization of tendon mechanical properties results from interfascicular differences
    Thorpe CT, Udeze CP, Birch HL, Clegg PD and Screen HRC
    Journal of The Royal Society Interface vol. 9 (76), 3108-3117.  
    07-11-2012
  • Pseudoelastic behaviour of a natural material is achieved via reversible changes in protein backbone conformation
    Harrington MJ, Wasko SS, Masic A, Fischer FD, Gupta HS and Fratzl P
    Journal of The Royal Society Interface vol. 9 (76), 2911-2922.  
    07-11-2012
  • Topographical regulation of primary cilia orientation and length in mesenchymal stem cells
    McMurray R and Knight M
    Cilia, Springer Nature vol. 1 (Suppl 1) 
    01-11-2012
  • The primary cilium conducts chondrocyte mechanotransduction
    Wann A, Zuo N, Haycraft C, Jensen C, Poole C, McGlashan S and Knight M
    Cilia, Springer Nature vol. 1 (Suppl 1) 
    01-11-2012
  • Mechanical strain disrupts primary cilia structure and modulates hedgehog signalling in adult chondrocytes
    Thompson C, Chapple J and Knight M
    Cilia, Springer Nature vol. 1 (Suppl 1) 
    01-11-2012
  • Heat-shock induces rapid resorption of primary cilia
    Thompson C, Prodromou N, Osborn D, Ashworth R, Knight M, Beales P and Chapple J
    Cilia, Springer Nature vol. 1 (Suppl 1) 
    01-11-2012
  • Bardet-Biedl syndrome proteins control cilia length through regulation of actin polymerisation
    Hernandez V, Pravincumar P, Diaz-Font A, May-Simera H, Jenkins D, Knight M and Beales P
    Cilia, Springer Nature vol. 1 (Suppl 1) 
    01-11-2012
  • A role for IFT88/the primary cilium in the inflammatory response to interleukin-1
    Wann A and Knight M
    Cilia, Springer Nature vol. 1 (Suppl 1) 
    01-11-2012
  • Endoplasmic spreading requires coalescence of vimentin intermediate filaments at force-bearing adhesions
    Lynch CD, Lazar AM, Iskratsch T, Zhang X and Sheetz MP
    Molecular Biology of The Cell, American Society For Cell Biology (Ascb) vol. 24 (1), 21-30.  
    31-10-2012
  • Optimization of the position of the acetabulum in a ganz periacetabular osteotomy by finite element analysis
    Zou Z, Chávez‐Arreola A, Mandal P, Board TN and Alonso‐Rasgado T
    Journal of Orthopaedic Research®, Wiley vol. 31 (3), 472-479.  
    23-10-2012
  • The Shape of the Urine Stream - From Biophysics to Diagnostics
    Wheeler APS, Morad S, Buchholz N and Knight MM
    Plos One vol. 7 (10) 
    16-10-2012
  • Two distinct phosphorylation events govern the function of muscle FHOD3
    Iskratsch T, Reijntjes S, Dwyer J, Toselli P, Dégano IR, Dominguez I and Ehler E
    Cellular and Molecular Life Sciences, Springer Nature vol. 70 (5), 893-908.  
    04-10-2012
  • On the specimen length dependency of tensile mechanical properties in soft tissues: gripping effects and the characteristic decay length.
    Anssari-Benam A, Legerlotz K, Bader DL and Screen HRC
    J Biomech vol. 45 (14), 2481-2482.  
    21-09-2012
  • Cell mechanics, structure, and function are regulated by the stiffness of the three-dimensional microenvironment.
    Chen J, Irianto J, Inamdar S, Pravincumar P, Lee DA, Bader DL and Knight MM
    Biophys J vol. 103 (6), 1188-1197.  
    19-09-2012
  • Viscoelastic Cell Mechanics and Actin Remodelling Are Dependent on the Rate of Applied Pressure
    Pravincumar P, Bader DL and Knight MM
    Plos One vol. 7 (9) 
    11-09-2012
  • Spatio-temporal development of the endothelial glycocalyx layer and its mechanical property in vitro
    Bai K and Wang W
    Journal of The Royal Society Interface vol. 9 (74), 2290-2298.  
    07-09-2012
  • Primary cilia elongation in response to interleukin-1 mediates the inflammatory response
    Wann AKT and Knight MM
    Cellular and Molecular Life Sciences vol. 69 (17), 2967-2977.  
    01-09-2012
  • Hypophosphatemic rickets is associated with disruption of mineral orientation at the nanoscale in the flat scapula bones of rachitic mice with development
    Karunaratne A, Davis GR, Hiller J, Esapa CT, Terrill NJ, Brown SDM, Cox RD, Thakker RV and Gupta HS
    Bone vol. 51 (3), 553-562.  
    01-09-2012
  • Recording IR spectra for individual electrospun fibers using an in situ AFM-synchrotron technique
    Stachewicz U, Hang F, Bailey RJ, Gupta HS, Frogley MD, Cinque G and Barber AH
    Materials Research Society Symposium Proceedings vol. 1424, 19-23.  
    20-08-2012
  • Differential cytotoxic response in keloid fibroblasts exposed to photodynamic therapy is dependent on photosensitiser precursor, fluence and location of fibroblasts within the lesion
    Mendoza J, Sebastian A, Allan E, Allan D, Mandal P, Alonso-Rasgado T and Bayat A
    Archives of Dermatological Research, Springer Nature vol. 304 (7), 549-562.  
    04-08-2012
  • Inert gas clearance from tissue by co-currently and counter-currently arranged microvessels.
    Lu Y, Michel CC and Wang W
    J Appl Physiol (1985) vol. 113 (3), 487-497.  
    01-08-2012
  • The mechanics of flexor tendon adhesions
    Branford OA, Lee DA, Bader DL and Grobbelaar AO
    Journal of Hand Surgery: European Volume vol. 37 (6), 555-563.  
    01-07-2012
  • The attachment of intrinsic and extrinsic, mobilized and immobilized adhesion cells to collagen and fibronectin
    Branford OA, Lee DA, Rolfe KJ and Grobbelaar AO
    Journal of Hand Surgery: European Volume vol. 37 (6), 564-572.  
    01-07-2012
  • PRESSURE RATE SENSITIVE VISCOELASTIC CELL DEFORMATION INVOLVES ACTIN REMODELLING
    Pravincumar P, Bader D and Knight M
    Journal of Biomechanics, Elsevier vol. 45 
    01-07-2012
  • Mimicking normal tissue architecture and perturbation in cancer with engineered micro-epidermis
    Gautrot JE, Wang C, Liu X, Goldie SJ, Trappmann B, Huck WTS and Watt FM
    Biomaterials vol. 33 (21), 5221-5229.  
    01-07-2012
  • Dynamic compressive strain influences chondrogenic gene expression in human periosteal cells: a case study.
    Bonzani IC, Campbell JJ, Knight MM, Williams A, Lee DA, Bader DL and Stevens MM
    J Mech Behav Biomed Mater vol. 11, 72-81.  
    01-07-2012
  • DISRUPTION OF MUSCLE STRESS-MEDIATED MINERAL ORIENTATION AT THE NANOSCALE IN THE SCAPULAR BONES OF RICKETS MICE WITH DEVELOPMENT
    Karunaratne A, Davis G, Hiller J, Esapa C, Terrill N, Brown S, Cox R, Thakker R and Gupta H
    Journal of Biomechanics, Elsevier vol. 45 
    01-07-2012
  • Contribution of stem cells to neointimal formation of decellularized vessel grafts in a novel mouse model
    Tsai TN, Kirton JP, Campagnolo P, Zhang L, Xiao Q, Zhang Z, Wang W, Hu Y and Xu Q
    American Journal of Pathology vol. 181 (1), 362-373.  
    01-07-2012
  • Strain transfer through the aortic valve
    Anssari-Benam A, Gupta HS and Screen HRC
    Journal of Biomechanical Engineering vol. 134 (6) 
    29-06-2012
  • Improving metabolic flux predictions using absolute gene expression data
    Lee D, Smallbone K, Dunn WB, Murabito E, Winder CL, Kell DB, Mendes P and Swainston N
    Bmc Systems Biology, Springer Nature vol. 6 (1) 
    19-06-2012
  • Changes in the stress in the femoral head neck junction after osteochondroplasty for hip impingement: A finite element study
    Alonso‐Rasgado T, Jimenez‐Cruz D, Bailey CG, Mandal P and Board T
    Journal of Orthopaedic Research®, Wiley vol. 30 (12), 1999-2006.  
    15-06-2012
  • Strain amplification in bone mechanobiology: a computational investigation of the in vivo mechanics of osteocytes
    Verbruggen SW, Vaughan TJ and McNamara LM
    Journal of The Royal Society Interface, The Royal Society vol. 9 (75), 2735-2744.  
    06-06-2012
  • Effect of increased strut porosity of calcium phosphate bone graft substitute biomaterials on osteoinduction
    Coathup MJ, Hing KA, Samizadeh S, Chan O, Fang YS, Campion C, Buckland T and Blunn GW
    Journal of Biomedical Materials Research - Part A vol. 100 A (6), 1550-1555.  
    01-06-2012
  • Shear stress modulates the expression of the atheroprotective protein Cx37 in endothelial cells
    Pfenniger A, Wong C, Sutter E, Cuhlmann S, Dunoyer-Geindre S, Mach F, Horrevoets AJ, Evans PC, Krams R and Kwak BR
    Journal of Molecular and Cellular Cardiology, Elsevier vol. 53 (2), 299-309.  
    29-05-2012
  • Magnetic resonance imaging-compatible tactile sensing device based on a piezoelectric array
    Hamed A, Masamune K, Tse ZTH, Lamperth M and Dohi T
    Proceedings of The Institution of Mechanical Engineers Part H Journal of Engineering in Medicine, Sage Publications vol. 226 (7), 565-575.  
    09-05-2012
  • UCP4 is a target effector of the NF-κB c-Rel prosurvival pathway against oxidative stress
    Ho JW-M, Ho PW-L, Liu H-F, So DH-F, Chan K-H, Tse ZH-M, Kung MH-W, Ramsden DB and Ho S-L
    Free Radical Biology and Medicine, Elsevier vol. 53 (2), 383-394.  
    08-05-2012
  • Prospective motion correction using tracking coils
    Qin L, Schmidt EJ, Tse ZTH, Santos J, Hoge WS, Tempany‐Afdhal C, Butts‐Pauly K and Dumoulin CL
    Magnetic Resonance in Medicine, Wiley vol. 69 (3), 749-759.  
    07-05-2012
  • Systems and synthetic biology of the vessel wall
    Frueh J, Maimari N, Lui Y, Kis Z, Mehta V, Pormehr N, Grant C, Chalkias E, Falck-Hansen M, Bovens S, Pedrigi R, Homma T, Coppola G and Krams R
    Febs Letters, Wiley vol. 586 (15), 2164-2170.  
    03-05-2012
  • 117 Conduction block induced by acidosis in HL-1 mouse atrial myocytes can be reversed by administering the gap junctional coupler rotigaptide
    Al-Aidarous SI, Roney CH, Peters FMD, Ng FS, Chowdhury RA and Peters NS
    Heart, Bmj vol. 98 (Suppl 1) 
    01-05-2012
  • A label-free aptasensor for the sensitive and specific detection of cocaine using supramolecular aptamer fragments/target complex by electrochemical impedance spectroscopy
    Zhang DW, Zhang FT, Cui YR, Deng QP, Krause S, Zhou YL and Zhang XX
    Talanta vol. 92, 65-71.  
    15-04-2012
  • Simple isolation method for the bulk isolation of wear particles from metal on metal bearing surfaces generated in a hip simulator test
    Lu F, Royle M, Lali FV, Hart AJ, Collins S, Housden J and Shelton JC
    Journal of Materials Science: Materials in Medicine vol. 23 (4), 891-901.  
    01-04-2012
  • Significant deterioration in nanomechanical quality occurs through incomplete extrafibrillar mineralization in rachitic bone: Evidence from in-situ synchrotron X-ray scattering and backscattered electron imaging
    Karunaratne A, Esapa CR, Hiller J, Boyde A, Head R, Bassett JHD, Terrill NJ, Williams GR, Brown MA, Croucher PI, Brown SDM, Cox RD, Barber AH, Thakker RV and Gupta HS
    Journal of Bone and Mineral Research vol. 27 (4), 876-890.  
    01-04-2012
  • Primary cilia mediate mechanotransduction through control of ATP-induced Ca2+ signaling in compressed chondrocytes
    Wann AKT, Zuo N, Haycraft CJ, Jensen CG, Poole CA, McGlashan SR and Knight MM
    Faseb Journal vol. 26 (4), 1663-1671.  
    01-04-2012
  • Left atrial wall stress distribution and its relationship to electrophysiologic remodeling in persistent atrial fibrillation
    Hunter RJ, Liu Y, Lu Y, Wang W and Schilling RJ
    Circulation: Arrhythmia and Electrophysiology vol. 5 (2), 351-360.  
    01-04-2012
  • Coronal plane hip muscle activation in football code athletes with chronic adductor groin strain injury during standing hip flexion
    Morrissey D, Graham J, Screen H, Sinha A, Small C, Twycross-Lewis R and Woledge R
    Manual Therapy vol. 17 (2), 145-149.  
    01-04-2012
  • Molecular MR Imaging of Collagen in Mouse Atherosclerosis by Using Paramagnetic CNA35 Micelles
    van Bochove GS, Sanders HMHF, de Smet M, Keizer HM, Mulder WJM, Krams R, Strijkers GJ and Nicolay K
    European Journal of Inorganic Chemistry, Wiley vol. 2012 (12), 2115-2125.  
    28-03-2012
  • Poster session 3
    Nanka O, Krejci E, Pesevski Z, Sedmera D, Smart N, Rossdeutsch A, Dube KN, Riegler J, Price AN, Taylor A, Muthurangu V, Turner M, Lythgoe MF, Riley PR, Kryvorot S, Vladimirskaya T, Shved I, Schwarzl M, Seiler S, Huber S, Steendijk P, Maechler H, Truschnig-Wilders M, Pieske B, Post H, Caprio C, Baldini A, Chiavacci E, Dolfi L and Verduci L
    Cardiovascular Research, Oxford University Press (Oup) vol. 93 (suppl_1), s92-s127.  
    15-03-2012
  • Poster session 1
    Schlueter J, Brand T, Henderson DJ, Boczonadi V, Humbert P, Chaudhry B, Sedmera D, Svatunkova J, Kockova R, Sankova B, Lopez Sanchez C, Franco D, Aranega A, Garcia-Martinez V, Demina E, Miroshikova V, Denisenko A, Schwarzman A, Sanchez-Cabo F, Torroja C, Benguria A, Buchan R, Srivastava P, Martinez F, Barton P, Cook S, Dopazo A, Lara-Pezzi E and Rai H
    Cardiovascular Research, Oxford University Press (Oup) vol. 93 (suppl_1), s9-s45.  
    15-03-2012
  • Stanley Melbourne Bruce in London, 1938–41
    Lee D
    The Journal of Imperial & Commonwealth History, Taylor & Francis vol. 40 (1), 45-65.  
    01-03-2012
  • Development of a hydroxyapatite coating containing silver for the prevention of peri-prosthetic infection.
    Ghani Y, Coathup MJ, Hing KA and Blunn GW
    J Orthop Res vol. 30 (3), 356-363.  
    01-03-2012
  • MRI guided electrophysiological intervention with a voltage-based electro-anatomic mapping system
    Tse Z, Dumoulin C, Watkins R, Byrd I, Schweitzer J, Kwong R, Michaud GF and Schmidt EJ
    Journal of Cardiovascular Magnetic Resonance, Elsevier vol. 14 (Suppl 1) 
    01-02-2012
  • Cardiac MRI with concurrent physiological monitoring using MRI-compatible 12-lead ECG
    Tse Z, Dumoulin C, Clifford G, Oster J, Jerosch-Herold M, Kwong R, Stevenson W and Schmidt EJ
    Journal of Cardiovascular Magnetic Resonance, Elsevier vol. 14 (Suppl 1) 
    01-02-2012
  • Scaling and mesostructure of Carbopol dispersions
    Gutowski IA, Lee D, de Bruyn JR and Frisken BJ
    Rheologica Acta, Springer Nature vol. 51 (5), 441-450.  
    18-01-2012
  • Direct numerical simulation of fluid flow and heat transfer in periodic wavy channels with rectangular cross-sections
    Sui Y, Teo CJ and Lee PS
    International Journal of Heat and Mass Transfer vol. 55 (1-3), 73-88.  
    15-01-2012
  • Implantation of a carotid cuff for triggering shear-stress induced atherosclerosis in mice.
    Kuhlmann MT, Cuhlmann S, Hoppe I, Krams R, Evans PC, Strijkers GJ, Nicolay K, Hermann S and Schäfers M
    Journal of Visualized Experiments, Myjove (59) 
    13-01-2012
  • Implantation of a Carotid Cuff for Triggering Shear-stress Induced Atherosclerosis in Mice
    Kuhlmann MT, Cuhlmann S, Hoppe I, Krams R, Evans PC, Strijkers GJ, Nicolay K, Hermann S and Schäfers M
    Journal of Visualized Experiments, Myjove (59) 
    13-01-2012
  • Improved outcome after peripheral nerve injury in mice with increased levels of endogenous Omega-3 polyunsaturated fatty acids
    Gladman SJ, Huang W, Lim SN, Dyall SC, Boddy S, Kang JX, Knight MM, Priestley JV and Michael-Titus AT
    Journal of Neuroscience vol. 32 (2), 563-571.  
    11-01-2012
  • Biomechanical conditioning enhanced matrix synthesis in nucleus pulposus cells cultured in agarase constructs with TGFβ
    CHOWDHURY TT, Tilwani RK and Bader DL
    , Editors: Goldsmith EC and Lin SK. Journal Functional Biomaterials vol. 3, 23-26.  
    05-01-2012
  • The effects of microporosity on osteoinduction of calcium phosphate bone graft substitute biomaterials
    Chan O, Coathup MJ, Nesbitt A, Ho CY, Hing KA, Buckland T, Campion C and Blunn GW
    Acta Biomaterialia vol. 8 (7), 2788-2794.  
    01-01-2012
  • Single photon counting fluorescence lifetime detection of pericellular oxygen concentrations.
    Hosny NA, Lee DA and Knight MM
    J Biomed Opt vol. 17 (1) 
    01-01-2012
  • Propagation of capillary waves and ejection of small droplets in rapid droplet spreading
    Ding H, Li EQ, Zhang FH, Sui Y, Spelt PDM and Thoroddsen ST
    Journal of Fluid Mechanics vol. 697, 92-114.  
    01-01-2012
  • Mechanical regulation of nuclear structure and function.
    Martins RP, Finan JD, Guilak F and Lee DA
    Annu Rev Biomed Eng vol. 14, 431-455.  
    01-01-2012
  • Kissing Balloon or Sequential Dilation of the Side Branch and Main Vessel for Provisional Stenting of Bifurcations Lessons From Micro-Computed Tomography and Computational Simulations
    Foin N, Torii R, Mortier P, De Beule M, Viceconte N, Chan PH, Davies JE, Xu XY, Krams R and Di Mario C
    Jacc Cardiovascular Interventions, Elsevier vol. 5 (1), 47-56.  
    01-01-2012
  • Increased expression of IL-6 family members in tendon pathology
    Legerlotz K, Jones ER, Screen HRC and Riley GP
    Rheumatology vol. 51 (7), 1161-1165.  
    01-01-2012
  • Gap junction permeability between tenocytes within tendon fascicles is suppressed by tensile loading
    Maeda E, Ye S, Wang W, Bader DL, Knight MM and Lee DA
    Biomechanics and Modeling in Mechanobiology vol. 11 (3-4), 439-447.  
    01-01-2012
  • Finding the weakest link – exploring integrin-mediated mechanical molecular pathways
    Roca-Cusachs P, Iskratsch T and Sheetz MP
    Journal of Cell Science, The Company of Biologists vol. 125 (13), 3025-3038.  
    01-01-2012
  • Extracellular-matrix tethering regulates stem-cell fate
    Trappmann B, Gautrot JE, Connelly JT, Strange DGT, Li Y, Oyen ML, Cohen Stuart MA, Boehm H, Li B, Vogel V, Spatz JP, Watt FM and Huck WTS
    Nature Materials 
    01-01-2012
  • Bioactivity And Bone Formation In Silicon-Substituted Hydroxyapatite
    Ozad U, Parish A and Hing KA
    Sakarya University Journal of Science, Lookus Bilisim vol. 16 (3), 170-177.  
    01-01-2012
  • Advances in Haptics, Tactile Sensing, and Manipulation for Robot‐Assisted Minimally Invasive Surgery, Noninvasive Surgery, and Diagnosis
    Hamed A, Tang SC, Ren H, Squires A, Payne C, Masamune K, Tang G, Mohammadpour J and Tse ZTH
    Journal of Robotics, Hindawi vol. 2012 (1), 1-14.  
    01-01-2012
  • Accelerated growth plate mineralization and foreshortened proximal limb bones in fetuin-A knockout mice.
    Seto J, Busse B, Gupta HS, Schäfer C, Krauss S, Dunlop JWC, Masic A, Kerschnitzki M, Zaslansky P, Boesecke P, Catalá-Lehnen P, Schinke T, Fratzl P and Jahnen-Dechent W
    Plos One vol. 7 (10) 
    01-01-2012